Hello, I am Jérémy Semhoun
Bio Informatician.

I have more than ten years experience as in the fields of NGS (Next Generation Sequencing) in Whole Genome, Whole Exome ou RNA Seq. I have done research in chimeric transcripts. I have also works on computational immunomics and epitope predictions..

Personal Info

  • nameJérémy Semhoun
  • date of birthOctober 07, 1982
  • e-mail
  • adressParis
  • phone
  • websitewww.jsemhoun.fr

En Francais

Resume

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Work Experience

  • Centre Étude du Polymorphisme Humain – Fondation Jean Dausset www.cephb.fr
    2009 - Now

    Bioinformatics Engineer.
    RNASeq and DNASeq analysis pipeline

  • Commissariat à l’Energie Atomique www.cea.fr
    2008

    Bioinformatics programming.
    Associés à une equipe de Biologiste pour la mise en place d'outils des outils bio-informatique du laboratoire.

  • Centre National de Recherche en Génétique Humaine www.cng.fr
    2005 – 2007

    Bioinformatics for Mass Spectrometry
    Application de la bio-informatique pour l'identification des fragments et application à l'ADN/ARN

  • Training Period at INRS – Institut Armand-Frappier (Quebec, CANADA) www.iaf.inrs.ca
    Spring 2001

    Micronutrient encapsulation and analysis of their conservation

Skills

  • Pipeline NGS 81%

  • Immunology in silico 64%

  • C/Java 52%

  • Python/Perl 78%

  • Ms Office 83%

Assets

  • Personalized Medicine
  • Programming
  • Technological Watch
  • Team Work
  • Biology
  • Cloud Computing

Education

  • University of Paris Diderot - 7 - M. Sc. in Bioinformatics
    2004 - 2005

    With Honor

  • University of Paris Diderot - 7 - M.A. in Bioinformatics
    2003 - 2004

    With Honor

  • University of Paris Diderot - 7 - B. Sc in Bioinformatics
    2002 - 2003

    With Honor

  • Ecole Nationale de Chimie Physique Biologie BTS de Biotechnologie
    2000 - 2002

    BTS (Two-Year Technical Degree) in Biotechnology

Take Away

  • English Version
  • Version Francaise

Publications

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Publications

  • Variation in genomic landscape of clear cell renal cell carcinoma across Europe.
    Nature Communication

    2014 Oct 29;5:5135. doi: 10.1038/ncomms6135

  • Ribo-polymerase chain reaction--a facile method for the preparation of chimeric RNA/DNA applied to DNA sequencing.
    Human Mutation

    2012 Jun;33(6):1010-5. doi: 10.1002/humu.22061. Epub 2012 Apr 4.

  • DNA sequencing by MALDI-TOF MS using alkali cleavage of RNA/DNA chimeras.
    Nucleic Acids Research

    2007;35(8):e62. Epub 2007 Apr 10.

Blog

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Contact Me

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Contact

Feel free to contact me. Maybe just to say hello.

  • Paris

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